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Software Engineer
Teradata
Oklahoma City, OK
This position is for a Software Engineer in the POD Services team within the TD Factory team. The position involves development, integration, functional and performance testing, and fault…
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Lead Site Reliability Engineer - Remote
SitusAMC
Oklahoma City, OK
In-depth knowledge on any of the GIT platforms such as Azure DevOps, GitHub etc.
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Threat & Vulnerability Management Security Engineer II
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The TVM Security Engineer II is a key member of the Threat & Vulnerability Management team, responsible for reducing enterprise technology risk through the identification, assessment,…
Added 1 min ago
Senior Full Stack Engineer
T. Rowe Price
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Added 1 min ago
Principal Engineer - Java/AWS, Zelle
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United States
Knowledge of Software Development Lifecycle (SDLC) best practices, software development methodologies (Agile, Scrum, LEAN etc) and DevOps practices
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Senior Software Engineer
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LAKE FOREST, IL · CHICAGO, IL
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Added 22 mins ago
Integration Platform Engineer I
Freeport McMoRan
Phoenix, AZ
…estimates for planning purposes. As the Integration Platform Engineer I, you will provide technical documentation for handing off solutions to the support team. Respond to and resolve…
Added 22 mins ago
HPC - Senior Software Integration Engineer - Linux, Bash, Docker
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Under the direction of the Director – Platform Technology and the Principal Platform Integration Engineer, this team member will support the direct execution and delivery of all technical…
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Reporting to the MCP DevOps Lead, Mayo Clinic Platform, the Senior Platform Engineer supports the Cloud financial operations (FinOps), security operations (SecOps), and Mayo Clinic…
Added 24 mins ago
Site Reliability Engineer I
Mastercard
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As a Site Reliability Engineer I, you will develop practical experience operating enterprise technology platforms while applying SRE and DevOps principles to production support.
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Site Reliability Engineer I
Mastercard
O Fallon, MO
The Service Operations Technology (SOT) BizOps team is seeking a Site Reliability Engineer (SRE) to support and enhance enterprise infrastructure, asset management, automation, and…
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DevSecOps Engineer
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Core4ce is hiring a Senior DevSecOps Engineer to support a large, secure Department of War (DoW) Security Operations Center (SOC). This is a hands-on engineering role responsible for…
Added 27 mins ago
Vice President – Full Java Stack Engineer
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Pittsburgh, PA
We are seeking a Vice President – Full Stack Engineer to join a mission-critical engineering team supporting a high-performance, regulated enterprise platform. This is a hands-on…
Added 27 mins ago
Full Stack Engineer
ewminds consulting Services
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· Drive DevOps excellence: automate CI/CD pipelines, environment provisioning, and release management with robust rollback strategies
Added 29 mins ago
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DevOps Engineer
TeleSolv Consulting
Washington, District of Columbia, United States, DC
- $105,000 to $140,000 USD / year
TeleSolv Consulting is seeking an experienced DevOps Engineer to support enterprise applications operating in Microsoft Windows and Azure environments. This position will help install,…
Added 31 mins ago
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Top Secret DevOps Engineer
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- $110,000 to $150,000 USD / year
Insight Global is seeking a DevOps Engineer to support their client in NGA Core at a customer location in St. Louis, Missouri. The DevOps Engineer will support the enterprise-scale platform…
Added 32 mins ago
Software Integration Engineer IV
Reflexive Concepts
Fort Meade, MD
Reflexive Concepts is seeking a skilled Software Integration Engineer IV to join our team!
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Solutions Architect
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Clearwater, FL
- $109,623 to $126,790 USD / year
A familiarity with modern continuous integration and continuous delivery (CI/CD) methodologies and DevOps practices using Azure DevOps, GitHub Actions, Azure Pipelines, and related…
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Melbourne, FL
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Solutions Architect
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Solutions Architect
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OMG Technology

Senior Bioinformatics Software Engineer – Pipeline Development (Remote, US)

Remote, United States

Remote

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Job details

Workplace: Remote
Experience: 7+ years of relevant experience, including 5–8+ years in bioinformatics software engineering.
Posting language: English
Posted: Nov 5, 2026

Original job description

Sr Bioinformatics Software Engineer – Pipeline Development (Remote, US)

We are looking to hire a candidate with the mentioned skill sets and experience for one of our clients within the diagnostics and pharma services company. This is contracting and REMOTE role.

Job Summary

We are seeking an experienced Senior Bioinformatics Software Engineer to design, develop, and maintain scalable, production-grade NGS bioinformatics pipelines supporting clinical diagnostics and genomic applications.

The ideal candidate will have strong hands-on experience with Nextflow, Seqera Platform, Python, AWS, Docker, and CI/CD, along with expertise in clinical-grade NGS pipeline development and regulated software environments.

Key Responsibilities

Design, develop, and optimize scalable NGS bioinformatics pipelines for clinical diagnostic applications.
Build and maintain workflow orchestration using Nextflow and Seqera Platform.
Develop production-ready bioinformatics software using advanced Python programming.
Deploy, scale, and optimize genomic analysis pipelines on AWS and AWS HealthOmics.
Implement containerized workflows using Docker and/or Singularity.
Develop CI/CD pipelines, automated testing, regression testing, and controlled software releases.
Ensure reproducibility, traceability, validation, and compliance with clinical software standards.
Collaborate with bioinformatics scientists, R&D, DevOps, and clinical teams to transition research algorithms into production environments.
Optimize pipeline performance, scalability, reliability, and cloud infrastructure costs.

Required Qualifications

MS or PhD in Bioinformatics, Computer Science, Engineering, or a related field.
7+ years of relevant experience, including 5–8+ years in bioinformatics software engineering.
Strong hands-on experience developing NGS analysis pipelines in production environments.
Advanced proficiency in Python and software engineering best practices.
Strong experience with Nextflow and Seqera Platform.
Experience deploying and scaling bioinformatics workflows on AWS.
Hands-on experience with Docker, Git, CI/CD, and automated testing.
Experience developing software in regulated clinical environments (ISO 13485, IEC 62304, ISO 15189, or equivalent).
Understanding of NGS assays, genomic data processing, and clinical diagnostics.

Preferred Qualifications

Experience with DRAGEN, Sentieon, or similar NGS analysis tools.
Hands-on experience with AWS HealthOmics.
Knowledge of AWS EC2, Batch, S3, and Lambda.
Experience with oncology genomics, liquid biopsy, or molecular diagnostics.
Familiarity with Singularity and workflow performance optimization.

Other Job Details:

Job Type: C2C or W2.
Duration: 6+ months with high possibility of extension.
Location: REMOTE.
Interviews: Video interviews.
Docs required: ID proof will be required.

Why Should You Apply?

Work with cutting edge NGS technologies, build scalable bioinformatics pipelines and contribute to innovative cancer diagnostics using Nextflow, Python and AWS. Chance to contribute to innovative cancer diagnostics using Nextflow, Python, and AWS.

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Skills

Python
AWS
Docker
CI/CD
Workflow
Test automation
Regulatory compliance
Research
Computer science
Git
Process data

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