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MTC

Accountant III

San Francisco, CA, United States

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Job details

Apply by: Nov 30, 2026
Posting language: English
Posted: Nov 6, 2026

Original job description

DEADLINE TO APPLY IS SUNDAY, NOVEMBER 29, 2026, AT 11:55 PM

FIRST ROUND INTERVIEWS ARE TENTATIVELY SCHEDULED FOR TUESDAY, DECEMBER 8, 2026

IF YOU ARE INTERESTED, PLEASE APPLY IMMEDIATELY

A resume is required with your application

Be ready to rethink your assumptions about the public sector. Dedicated and motivated colleagues? Beautiful, high amenity building for on-site work and collaboration? Flexible schedules and hybrid work options? Yes, yes, and yes!

ABOUT THE ROLE

This position is part of the Toll Services and Revenue Section and reports directly to the Financial Program Manager responsible for the Clipper Program’s financial operations. The Clipper Program is the Bay Area's regional fare payment system serving 28 participating transit operators. The back-office system is operated under contract by a third-party vendor, Cubic Transportation Systems (Cubic). The Clipper Program uses Microsoft Dynamics Finance & Operations (MSDFO) enterprise resource planning platform for accounting functions, including general ledger. The Accountant serves as a key member of the Clipper Program Finance team and is responsible for supporting the financial management, governance, and continuous improvement of the regional fare payment program. This position combines advanced accounting, financial systems, internal controls, audit support, vendor management, financial analysis, regional transit finance, and process improvement to ensure the accuracy, integrity, and effective oversight of the program's financial operations. Responsibilities include performing complex financial reconciliations, validating settlement activities, monitoring internal controls, supporting audits, coordinating with Cubic, participating transit operators, and the MTC Clipper operation team, and developing financial procedures that strengthen operational efficiency, financial governance, and long-term program sustainability.

Program Financial Management & Vendor Coordination

Support the financial management and governance of the Clipper Program.
Serve as the Finance liaison with back-office system vendor regarding financial reporting, settlements, reconciliations, and accounting issues.
Monitor financial performance, trends, and risks, and prepare analyses, dashboards, reconciliation summaries, management reports, and performance metrics for management decision-making.
Collaborate with participating transit operators, consultants, and internal departments to resolve financial issues and track commitments, program initiatives, and system enhancements through completion.
Support financial system implementations, upgrades, releases, and other process-improvement initiatives.

Financial Reconciliation & Accounting

Perform complex reconciliations between banking records, general ledger, subledger reports, and back-office system reports.
Analyze and investigate financial and reconciliation variances, identify root causes, and recommend corrective actions.
Validate financial transactions and general ledger use cases supporting revenue recognition and operator settlements.
Review trial balances, accounting entries, and financial reports while supporting monthly, quarterly, and annual financial close activities.

Financial Controls, Procedures & Audit Support

Evaluate the design and operation of financial controls and recommend best-practice updates to accounting policies, procedures, business rules, and process documentation.
Monitor compliance with applicable accounting and auditing standards, banking requirements, contract provisions, and agency procedures; support internal and external audits by preparing schedules and evidence and coordinating information requests.
Track control, reporting, and process issues with vendor and internal owners through resolution, and document and validate the resulting corrective actions.
Review financial procedures, user guides, reconciliation documentation, and operational manuals for completeness, clarity, consistency, and usability, and recommend updates that support knowledge transfer and sustainable operations.

Data Analysis & Other

Analyze high-volume financial and transaction data using Microsoft Excel, Power BI, or other comparable data analytics tools to identify trends, exceptions, and improvement opportunities.
Perform other job-related duties as needed or assigned.

KNOWLEDGE, SKILLS, & ABILITIES

Knowledge of

Generally Accepted Accounting Principles (GAAP), including accrual accounting and financial reporting.
Generally Accepted Auditing Standards (GAAS), internal control principles, compliance requirements, and audit documentation.
Governmental accounting principles and public-sector financial reporting.
Enterprise financial systems, system interfaces, and high-volume transaction processing.
Fare payment settlement processes, revenue accounting, bank reconciliations, and the flow of transactions from the back-office system to the general ledger.
Financial analysis, data analytics, performance reporting, and reconciliation methodologies.
Third-party vendor oversight and contract management.
Microsoft Excel and Power BI or other data analytics tools.

Ability to

Take ownership of assignments, track tasks and progress, manage multiple priorities, and meet established schedules with minimal supervision.
Analyze complex financial transactions and identify, investigate and clearly explain discrepancies.
Perform detailed reconciliations across multiple systems and validate the completeness and accuracy of financial output
Evaluate vendor reports, system processes, and supporting documentation and communicate findings and recommendations.
Interpret and apply accounting policies, contract requirements, business rules, and financial procedures.
Prepare concise management reports, audit support, and process documentation.
Communicate effectively and work collaboratively with internal teams, vendors, auditors, consultants, and regional partners.

MINIMUM QUALIFICATIONS

Any combination of training and experience that would provide the required knowledge, skills, and abilities listed. A typical way to obtain the required qualifications would be: Education and Experience: Equivalent to a bachelor’s degree from an accredited college or university with major coursework in accounting, finance, business or public administration, or a related field and five (5) years of increasingly responsible professional accounting or financial analysis experience

PREFERRED QUALIFICATIONS

Experience:

Of those five years, at least two (2) years in the public sector, transportation, tolling, transit, or a high-volume payment environment.
Experience operating complex enterprise financial systems in a high-volume transaction environment, such as Microsoft Dynamics 365 Finance & Operations, SAP, Oracle, or comparable ERP platforms.
Experience supporting a financial system implementation, upgrade, integration, or release.
Experience working in a regulated environment requiring internal controls, audit support, and compliance documentation.

Licenses or Certificates: Certified Public Accountant (CPA) designation preferred.

Applicants with a degree issued by an institution outside the United States who are using that degree to meet the minimum qualifications for the position must have their transcripts evaluated by an academic credential evaluation service and provide proof of equivalency with their application. An evaluation is generally not required if: 1. The position does not require a degree, 2. You qualify through work experience alone, 3. You hold a professional license or certification that satisfies the educational requirement, or 4. You have another degree earned in the United States that independently satisfies the educational requirement. To ensure a fair and consistent review, any required academic evaluation must be submitted at the time of application so qualifications can be verified before candidates advance in the recruitment process.

The Metropolitan Transportation Commission (MTC) is the transportation planning, financing, and coordinating agency for the nine-county San Francisco Bay Area. MTC is the federally designated Metropolitan Planning Organization (MPO) and the state designated Regional Transportation Planning Agency (RTPA) for the nine-county San Francisco Bay Area. MTC provides services to the Association of Bay Area Governments (ABAG). For more information about MTC, visit www.mtc.ca.gov.

EQUAL OPPORTUNITY EMPLOYER

The Metropolitan Transportation Commission is an equal-opportunity, non-discriminatory employer. MTC provides all employees and applicants with an equal opportunity in every aspect of the employment experience regardless of race, color, religion, sex, sexual orientation, gender identity, age, national origin, physical handicap, medical condition or marital status.

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More about this job

Skills

Collaboration
Clipper
Microsoft Dynamics
General ledger
Financial management
Process improvement
Vendor management
Financial analysis
Account reconciliation
Financial reporting
Decision making
Accounting entries
Documentation
Regulatory compliance
Auditing
Reporting
Data analysis
Microsoft Excel
Microsoft Power BI
Transaction processing
Contract management
Dynamics 365
SAP
Oracle
ERP
CPA
Recruitment

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