Jobs in the United States

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Added 10 mins ago
G
Civil Engineer
GPAC
Atlanta, GA
- $80,000 to $90,000 USD / year
A well-established and growing engineering firm in Columbia, SC is looking to add a Civil Design Engineer to its dynamic team! This is an excellent opportunity for an engineer with…
Added 10 mins ago
G
Civil Engineer, P.E.
GPAC
Minneapolis, MN
- $95,000 to $110,000 USD / year
A well-established and growing engineering firm in Minneapolis, MN is looking to add a Civil Engineer to its dynamic team! This is an excellent opportunity for an engineer with experience…
Added 10 mins ago
G
Civil Engineer - Land Development/Design
GPAC
Colorado Springs, CO
- $95,000 to $135,000 USD / year
Are you an experienced Civil Engineer looking to take the next step in your career? A growing engineering team is seeking a Civil Engineer specializing in Site Development to contribute to…
Added 10 mins ago
G
Civil Engineer, P.E. Site Development
GPAC
Indianapolis, IN
- $85,000 to $100,000 USD / year
Are you an experienced Civil Engineer looking to take the next step in your career? A growing engineering team is seeking a Civil Engineer specializing in Site Development to contribute to…
Added 12 mins ago
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Transportation Engineer, P.E.
GPAC
Minneapolis, MN
- $115,000 to $145,000 USD / year
A growing engineering team is seeking a Transportation Engineer, P.E. to support the planning, design, and delivery of transportation infrastructure projects throughout the Minneapolis area.
Added 13 mins ago
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Water - Waste Water Engineer, P.E.
GPAC
Minneapolis, MN
- $105,000 to $135,000 USD / year
The ideal candidate will bring strong technical knowledge, project management capabilities, and the ability to build relationships with clients, municipalities, and industry professionals.
Added 19 mins ago
GH
Field Engineer Team Lead
GE HealthCare
Remote, United States
- $94,400 to $141,600 USD / year
…satisfaction and Service Excellence per contract. May perform some technical service work (up to 40%) however the primary function of the role is leadership support and mentoring for the…
Added 19 mins ago
Data Engineer, Analytics (Technical Leadership)
Meta
Augusta, ME
Data Engineer, Analytics (Technical Leadership) Responsibilities:
Added 19 mins ago
Cloud Engineer
Maximus
Augusta, ME
Maximus is seeking a Cloud Engineer to support a defense client remotely.
Added 19 mins ago
Network Operations Engineer
Meta
Augusta, ME
Meta is seeking a Network Operations Engineer to join our Edge and Network Services (ENS) Foundation NetOps team. In this role, you will utilize your knowledge in hyperscale data center…
Added 19 mins ago
Director - Customer Response Engineering
Trellix
Augusta, ME
Partner with Technical Support, Customer Success, Product Management, and Engineering so issues reach the right engineer fast and customer feedback reaches the roadmap.
Added 19 mins ago
Mechanical Engineer, Data Center Operations Engineering
Meta
Augusta, ME
Meta is seeking a Mechanical Engineer to join our Data Center Operations Engineering team. Our data centers are the foundation upon which our rapidly growing infrastructure efficiently…
Added 19 mins ago
C
Java Full Stack Engineer with Spring boot/AWS Experience
Cognizant
Augusta, ME
- $86,000 to $99,000 USD / year
Provide technical leadership on cloud-native architectures, microservices, and event-driven solutions to support scalable and secure platforms.
Added 19 mins ago
C
Java Full Stack Engineer with Spring boot/AWS Experience
Cognizant
Augusta, ME
- $86,000 to $99,000 USD / year
Provide technical leadership on cloud-native architectures, microservices, and event-driven solutions to support scalable and secure platforms.
Added 19 mins ago
EG
Cloud Engineer
Eliassen Group
Augusta, ME
- $70 to $88 USD / hour
Our client seeks a senior Cloud Engineer to own and stabilize a legacy GCP and Azure footprint while assisting with conversions and decommissioning. The role will support automation efforts…
Added 19 mins ago
EG
Databricks Data Engineer
Eliassen Group
Augusta, ME
- $150,000 to $154,000 USD / year
Our client seeks a Databricks Data Engineer to design, build, and maintain scalable, reliable, and secure data pipelines, infrastructure, and systems that support consulting services and…
Added 20 mins ago
Corporate Sales Engineer, Customer Sales (Remote)
CrowdStrike
Jefferson City, MO
+ Work collaboratively with Sales, Marketing, Support, and Engineering; the Sales Engineer should be the technical bridge between CrowdStrike and prospects/customers
Added 24 mins ago
Applications Engineer II IS -Remote
Providence
MT
The Application Engineer II is responsible for design, configuration, testing, implementation, and ongoing support of moderately complex applications and services. This role operates with…
Added 24 mins ago
Associate Director, Practice Builder
Ulteig Engineers, Inc.
Billings, MT
Build leadership capability by coaching managers, technical leaders, project managers, and emerging leaders; strengthen succession readiness and address performance, capability, and…
Added 24 mins ago
Data Engineer, Analytics (Technical Leadership)
Meta
Helena, MT
Data Engineer, Analytics (Technical Leadership) Responsibilities:
Added 24 mins ago
Cloud Engineer
Maximus
Helena, MT
Maximus is seeking a Cloud Engineer to support a defense client remotely.
Added 24 mins ago
Director - Customer Response Engineering
Trellix
Helena, MT
Partner with Technical Support, Customer Success, Product Management, and Engineering so issues reach the right engineer fast and customer feedback reaches the roadmap.
Added 24 mins ago
Mechanical Engineer, Data Center Operations Engineering
Meta
Helena, MT
Meta is seeking a Mechanical Engineer to join our Data Center Operations Engineering team. Our data centers are the foundation upon which our rapidly growing infrastructure efficiently…
Added 24 mins ago
C
Java Full Stack Engineer with Spring boot/AWS Experience
Cognizant
Helena, MT
- $86,000 to $99,000 USD / year
Provide technical leadership on cloud-native architectures, microservices, and event-driven solutions to support scalable and secure platforms.
Added 24 mins ago
Network Operations Engineer
Meta
Helena, MT
Meta is seeking a Network Operations Engineer to join our Edge and Network Services (ENS) Foundation NetOps team. In this role, you will utilize your knowledge in hyperscale data center…

Baylor Genetics

Senior Bioinformatics Software Engineer

Remote, United States

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Job details

Posting language: English
Posted: Nov 6, 2026

Original job description

JOB SUMMARY

The Senior Bioinformatics (BI) Software Engineer holds a critical technical role, responsible for designing, developing, and maintaining scalable and efficient software solutions for Baylor Genetics’ bioinformatic pipelines. This role involves collaborating with and supporting cross-functional teams to deliver data-driven software solutions aligning with business needs.

KEY RESPONSIBILITIES

BI Development:Design, develop, and maintain robust software solutions using various tools, databases, and technologies to meet business requirements.
Data Modeling:Create and optimize data models, ensuring the accuracy, integrity, and performance of the underling computational algorithms, especially as pertains to assembly, mapping, variant calling and variant annotation.
ETL Processes:Develop and optimize ETL (Extract, Transform, Load) processes to efficiently extract data from various sources, transform it, and load it into the BI system, with an emphasis on utilizing APIs
Query Optimization:Analyze and optimize SQL queries and database performance to enhance data retrieval and reporting speed. Contribute to schema design and review sessions to ensure high performance and maintainable databases.
Dashboard & Report Creation:Develop interactive dashboards and automated reports using BI tools (e.g., Azure Pipelines, Teams Power Automate, email, Nextflow) to provide actionable insights for stakeholders.
Collaboration:Work and align closely with stakeholders, including data analysts, business users, clinical reviewers, laboratory personnel and software developers, to scope their requirements and deliver timely integrations of new software.
Data Integration:Integrate disparate data sources and ensure consistency, accuracy, and reliability of data across the BI system, with a focus on devising systems that have minimal to no code debt and are highly maintainable and flexible.
Quality Assurance:Conduct rigorous testing of BI solutions to ensure data accuracy, system stability, and optimal performance, with the ability to automate testing suites using packages (e.g. pytest, doctest, Azure Pipelines)
Documentation & Maintenance:Create comprehensive documentation for developed solutions and provide support and maintenance as necessary. This generally includes: (1) detailed in-line commenting noting Jira ticket request numbers, genomic diagrams, reasoning and personal thoughts, TODO comments, docstrings, BG headers, etc.; (2) wikis and README files instructing users on how to install and implement the software along with trace mappings detailing how the software is generally organized.

QUALIFICATIONS

Required

Education:Bachelor’s degree in Computer Science, Software Engineering, Bioinformatics or a related field; Master’s degree preferred.
Experience:Minimum of 5 years of experience in software development, with a proven track record of designing and implementing scalable software solutions based on diverse user feature needs. Must have a proven track record of implementing production ready software solutions from scratch. Prior experience or domain knowledge from collaborating with laboratory scientists, computational biologists, or clinical reviewers is a nice-to-have.

COMPETENCIES

Technical Skills:

Deep knowledge and expertise in at least two programming languages (Python, Perl, R, or Bash, will also consider Java, C++, and Groovy).
Proficient in a range of database technologies, including SQL Server, NoSQL, MongoDB, MySQL, and ElasticSearch, demonstrating comprehensive skills in database management, optimization, and query development.
Proficiency in working in an Agile framework and implementing CI/CD practices using Git. Knowledge of Azure is a bonus.Implementation of object orientated programming (OOP) is second nature, which includes building intuitive classes relevant to the science, system, or service.
Standard software design practices relevant to that language is intuitive to you. Demonstrated ability to build entire software packages from scratch that are performant and highly maintainable, ensuring they are tested and are production ready. Solid understanding and habitual practice of unit and integration testing of software.
High regard for documentation and object/variable naming that is explicit, with the ability to relay or distill scientific concepts within supplemental documentation or inline code itself.
Proficiency in designing and building APIs and microservices from scratch.
Familiarity with Linux OS and HPC clusters (SLURM, Kubernetes, GCP, Azure, etc.) is a plus, but not essential.
Solid understanding of package management practices (PIP, Conda, etc.) and containerization (Docker, Singularity, etc.).
Proficiency or knowledge of workflow management or orchestration tools (Nextflow, Airflow, Snakemake, etc.) is a plus, but not essential.

Analytical Thinking: Strong analytical and problem-solving skills with the ability to translate complex business needs into technical solutions and work independently to solve problems. Also requires good communication skills and flexibility to reach out to stakeholders and SMEs as necessary

Team Collaboration:Excellent interpersonal and communication skills to collaborate effectively with multidisciplinary teams. Should be open and willing to receive and give criticism and feedback in a measured manner, focused on solving the problem at hand.
Adaptability:Ability to adapt to evolving technologies, learn new tools, and implement best practices in BI software engineering and development. Should be able to assess situations when a drop-in solution would be preferable to a custom software implementation and run proof-of-concepts as needed. Should be highly familiar with best practices in software development and an advocate of best practices, even under pressure.
Project Management:Experience in managing individual projects and adhering to timelines while delivering high-quality solutions, ensuring good communication in situations where project scopes may fluctuate
Performs other advanced job-related duties as assigned.

PHYSICAL DEMANDS AND WORK ENVIRONMENT

Frequently required to sit.
Frequently required to stand.
Frequently required to utilize hand and finger dexterity.
Frequently required to talk or hear.

EEO STATEMENT

Baylor Genetics is proud to be an equal opportunity employer dedicated to building an inclusive and diverse workforce. We do not discriminate based on race, religion, color, national origin, sex, sexual orientation, age, gender identity, veteran status, disability, genetic information, pregnancy, childbirth, or related medical conditions, or any other status protected under applicable federal, state, or local law.

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More about this job

Skills

Data modelling
Data models
Assembly
Data engineering
SQL
Reporting
Microsoft Azure
Microsoft Teams
Microsoft Power Automate
Collaboration
Quality assurance
Documentation
Jira
Computer science
Software development
Programming languages
Python
Perl
R
Bash
Oracle Java
C++
Apache Groovy
Microsoft SQL Server
NoSQL
MongoDB
MySQL
Elasticsearch
Agile
CI/CD
Git
Microservices
Linux
Kubernetes
Google Cloud
Docker
Workflow
Apache Airflow
Snakemake
Analytical skills

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