Jobs in the United States

25+ jobs

Save this search

Added just now
TS
Software Engineer II
TGW Systems Inc
Grand Rapids, MI
- $90,000 to $115,000 USD / year
The Software Engineer II is a mid-level engineer who works with a team of Software Engineers to design, develop, test, commission, and provide ongoing support of TGW software solutions.
Added 1 min ago
Manufacturing Engineer (Starlink Development)
SpaceX
Bastrop, TX
As a Manufacturing Engineer on the Development Operations team, you will own how Starlink hardware gets built. You will lead the factory projects that put new tooling and automation on the…
Added 1 min ago
C
Senior AI Developer
ClickUp
Remote, United States
- $200,000 to $250,000 USD / year
We're looking for a highly skilled and experienced Senior AI Engineer to join our ClickUp Engineering team, with a focus on AI evaluations. You'll own how we measure and improve the quality…
Added 1 min ago
AD
Mobility Engineer
Agile Defense
Ashburn, VA
- $125,000 to $135,000 USD / year
Our vision is to bring adaptive innovation to support our nation's most important missions through the seamless integration of advanced technologies, elite minds, and unparalleled agility -…
Added 2 mins ago
IG
Staff Systems Engineer
Insight Global
Remote, United States
- From $100 USD / hour
Lead systems engineering activities throughout the full development lifecycle, including requirements definition, architecture, integration, verification, validation, and delivery.
Added 5 mins ago
Data Engineer, Sr
loanDepot
Irvine, CA
Creates data and reporting infrastructure by building and optimizing production-grade data pipelines using continuous integration/ continuous deployment.
Added 5 mins ago
Systems Engineer
Thrive
SC
Develop a strong understanding of Thrive products and their integration into client environments to ensure efficient and effective issue resolution.
Added 6 mins ago
Systems Engineer (Technical Integration & Analysis)
Arcfield
Chantilly, VA
Arcfield is seeking a Systems Engineer to support the development and integration of advanced space-based sensing and mission capabilities supporting US Space Force and national security.…
Added 6 mins ago
Systems Architecture Engineer
Arcfield
Chantilly, VA
Arcfield is seeking an experienced Systems Architecture Engineer to support the development and integration of advanced space-based sensing and mission capabilities supporting US Space…
Added 6 mins ago
Project Management Project Engineer
Arcfield
Westfields, VA
Arcfield is seeking a Project Management Project Engineer with a background in project management to support our client on-site in Chantilly, VA.
Added 6 mins ago
Systems Integration Engineer
Arcfield
Westfields, VA
Arcfield is seeking an experienced Systems Integration Engineer to support the All-Domain Overhead Cooperative Operations (AOCO) Joint Program Integration Office (JPIO) as a member of the…
Added 7 mins ago
Applied Super Intelligence Engineer, Physical Systems
LLNL
Livermore, CA
We are seeking an Applied Super Intelligence (SI) Engineer, Physical Systems, to help build software that enables SI agents and multimodal models to interact with real-world equipment…
Added 7 mins ago
Principal AI Engineer
Scotiabank
Dallas, TX
We are seeking a Principal Engineer to lead the discovery, architecture, and delivery of AI and agentic solutions across Canadian Banking, International Banking, Global Banking and Markets…
Added 7 mins ago
Full Stack Engineer
Scotiabank
Dallas, TX
As a Software Engineer, you will design and develop scalable software solutions supporting quality controls, business rules, automation, and enterprise data management capabilities.
Added 9 mins ago
Senior Engineer, Business Intelligence
Walton Enterprises
Bentonville, AR
Walton Enterprises is seeking a skilled, highly motivated and entrepreneurial individual to join the team as a Senior Engineer, Business Intelligence. The ideal teammate will have the…
Added 9 mins ago
Engineer Senior Principal – Space Vehicle Systems / Simulators
BAE Systems
Boulder, CO
Job Description Our Aerospace & Mission Systems (AMS) division is seeking a Principal Systems/Software Engineer to join our Space Vehicle Simulator team. In this role, you will work at the…
Added 10 mins ago
ITS Engineer
Arup
Seattle, WA
Our Americas region at Arup is seeking a talented and motivated Intelligent Transportation Systems (ITS) Engineer with one to four years of relevant experience. The successful candidate…
Added 10 mins ago
Signaling & Train Control Engineer
Arup
Sacramento, CA
…range of services spanning planning, design, delivery, systems integration, assurance, safety and security assessments, and optimization of railway operation and maintenance performance to…
Added 10 mins ago
Water Services Leader
Arup
San Francisco, CA
· Support recruiting, onboarding, and integration of new team members as we grow in Northern California and across the region.
Added 10 mins ago
Water Services Leader
Arup
Los Angeles, CA
· Support recruiting, onboarding, and integration of new team members as we grow in Southern California and across the region.
Added 11 mins ago
Enterprise Sales Engineer - Public Sector - West
Samsara
Remote, United States
As a Public Sector Enterprise Core Sales Engineer at Samsara, you’ll be splitting your time across two major focus areas; (1) supporting senior-level sellers in an attempt to grow existing…
Added 11 mins ago
Software Development Engineer in Test II (SDET II)
Verisk | Verisk
Jersey City, NJ
…small number of agile teams serving as the Software Development Engineer in Test and drive all processes and tools used to achieve automated regression & functional testing. Prior…
Added 11 mins ago
A
Software Engineer
Actalent
Irvine, CA
- $70 USD / hour
Software Engineer II Next-Generation Embedded & AI-Driven Platform Development
Added 11 mins ago
Sr Electrical Design Engineer
Actalent
Cedar Park, TX
Job Title: Senior Electrical Design EngineerJob DescriptionThe Senior Electrical Design Engineer provides advanced technical expertise in facilities and industrial power systems, delivering…
Added 11 mins ago
Senior Software Engineer - EQ Derivatives Pricing & Risk
Millennium
New York
…and Risk Managers. We are looking for a very strong senior engineer with deep knowledge of equity derivatives products and their pricing and risk…

Baylor Genetics

Senior Bioinformatics Software Engineer

Remote, United States

Apply About employer

Applications open in a new tab.

Job details

Posting language: English
Posted: Nov 6, 2026

Original job description

JOB SUMMARY

The Senior Bioinformatics (BI) Software Engineer holds a critical technical role, responsible for designing, developing, and maintaining scalable and efficient software solutions for Baylor Genetics’ bioinformatic pipelines. This role involves collaborating with and supporting cross-functional teams to deliver data-driven software solutions aligning with business needs.

KEY RESPONSIBILITIES

BI Development:Design, develop, and maintain robust software solutions using various tools, databases, and technologies to meet business requirements.
Data Modeling:Create and optimize data models, ensuring the accuracy, integrity, and performance of the underling computational algorithms, especially as pertains to assembly, mapping, variant calling and variant annotation.
ETL Processes:Develop and optimize ETL (Extract, Transform, Load) processes to efficiently extract data from various sources, transform it, and load it into the BI system, with an emphasis on utilizing APIs
Query Optimization:Analyze and optimize SQL queries and database performance to enhance data retrieval and reporting speed. Contribute to schema design and review sessions to ensure high performance and maintainable databases.
Dashboard & Report Creation:Develop interactive dashboards and automated reports using BI tools (e.g., Azure Pipelines, Teams Power Automate, email, Nextflow) to provide actionable insights for stakeholders.
Collaboration:Work and align closely with stakeholders, including data analysts, business users, clinical reviewers, laboratory personnel and software developers, to scope their requirements and deliver timely integrations of new software.
Data Integration:Integrate disparate data sources and ensure consistency, accuracy, and reliability of data across the BI system, with a focus on devising systems that have minimal to no code debt and are highly maintainable and flexible.
Quality Assurance:Conduct rigorous testing of BI solutions to ensure data accuracy, system stability, and optimal performance, with the ability to automate testing suites using packages (e.g. pytest, doctest, Azure Pipelines)
Documentation & Maintenance:Create comprehensive documentation for developed solutions and provide support and maintenance as necessary. This generally includes: (1) detailed in-line commenting noting Jira ticket request numbers, genomic diagrams, reasoning and personal thoughts, TODO comments, docstrings, BG headers, etc.; (2) wikis and README files instructing users on how to install and implement the software along with trace mappings detailing how the software is generally organized.

QUALIFICATIONS

Required

Education:Bachelor’s degree in Computer Science, Software Engineering, Bioinformatics or a related field; Master’s degree preferred.
Experience:Minimum of 5 years of experience in software development, with a proven track record of designing and implementing scalable software solutions based on diverse user feature needs. Must have a proven track record of implementing production ready software solutions from scratch. Prior experience or domain knowledge from collaborating with laboratory scientists, computational biologists, or clinical reviewers is a nice-to-have.

COMPETENCIES

Technical Skills:

Deep knowledge and expertise in at least two programming languages (Python, Perl, R, or Bash, will also consider Java, C++, and Groovy).
Proficient in a range of database technologies, including SQL Server, NoSQL, MongoDB, MySQL, and ElasticSearch, demonstrating comprehensive skills in database management, optimization, and query development.
Proficiency in working in an Agile framework and implementing CI/CD practices using Git. Knowledge of Azure is a bonus.Implementation of object orientated programming (OOP) is second nature, which includes building intuitive classes relevant to the science, system, or service.
Standard software design practices relevant to that language is intuitive to you. Demonstrated ability to build entire software packages from scratch that are performant and highly maintainable, ensuring they are tested and are production ready. Solid understanding and habitual practice of unit and integration testing of software.
High regard for documentation and object/variable naming that is explicit, with the ability to relay or distill scientific concepts within supplemental documentation or inline code itself.
Proficiency in designing and building APIs and microservices from scratch.
Familiarity with Linux OS and HPC clusters (SLURM, Kubernetes, GCP, Azure, etc.) is a plus, but not essential.
Solid understanding of package management practices (PIP, Conda, etc.) and containerization (Docker, Singularity, etc.).
Proficiency or knowledge of workflow management or orchestration tools (Nextflow, Airflow, Snakemake, etc.) is a plus, but not essential.

Analytical Thinking: Strong analytical and problem-solving skills with the ability to translate complex business needs into technical solutions and work independently to solve problems. Also requires good communication skills and flexibility to reach out to stakeholders and SMEs as necessary

Team Collaboration:Excellent interpersonal and communication skills to collaborate effectively with multidisciplinary teams. Should be open and willing to receive and give criticism and feedback in a measured manner, focused on solving the problem at hand.
Adaptability:Ability to adapt to evolving technologies, learn new tools, and implement best practices in BI software engineering and development. Should be able to assess situations when a drop-in solution would be preferable to a custom software implementation and run proof-of-concepts as needed. Should be highly familiar with best practices in software development and an advocate of best practices, even under pressure.
Project Management:Experience in managing individual projects and adhering to timelines while delivering high-quality solutions, ensuring good communication in situations where project scopes may fluctuate
Performs other advanced job-related duties as assigned.

PHYSICAL DEMANDS AND WORK ENVIRONMENT

Frequently required to sit.
Frequently required to stand.
Frequently required to utilize hand and finger dexterity.
Frequently required to talk or hear.

EEO STATEMENT

Baylor Genetics is proud to be an equal opportunity employer dedicated to building an inclusive and diverse workforce. We do not discriminate based on race, religion, color, national origin, sex, sexual orientation, age, gender identity, veteran status, disability, genetic information, pregnancy, childbirth, or related medical conditions, or any other status protected under applicable federal, state, or local law.

Apply About employer

More about this job

Skills

Data modelling
Data models
Assembly
Data engineering
SQL
Reporting
Microsoft Azure
Microsoft Teams
Microsoft Power Automate
Collaboration
Quality assurance
Documentation
Jira
Computer science
Software development
Programming languages
Python
Perl
R
Bash
Oracle Java
C++
Apache Groovy
Microsoft SQL Server
NoSQL
MongoDB
MySQL
Elasticsearch
Agile
CI/CD
Git
Microservices
Linux
Kubernetes
Google Cloud
Docker
Workflow
Apache Airflow
Snakemake
Analytical skills

Report this job